diff options
Diffstat (limited to 'src/leap/soledad/client/_db')
| -rw-r--r-- | src/leap/soledad/client/_db/__init__.py | 0 | ||||
| -rw-r--r-- | src/leap/soledad/client/_db/adbapi.py | 298 | ||||
| -rw-r--r-- | src/leap/soledad/client/_db/blobs.py | 554 | ||||
| -rw-r--r-- | src/leap/soledad/client/_db/dbschema.sql | 42 | ||||
| -rw-r--r-- | src/leap/soledad/client/_db/pragmas.py | 379 | ||||
| -rw-r--r-- | src/leap/soledad/client/_db/sqlcipher.py | 633 | ||||
| -rw-r--r-- | src/leap/soledad/client/_db/sqlite.py | 930 |
7 files changed, 2836 insertions, 0 deletions
diff --git a/src/leap/soledad/client/_db/__init__.py b/src/leap/soledad/client/_db/__init__.py new file mode 100644 index 00000000..e69de29b --- /dev/null +++ b/src/leap/soledad/client/_db/__init__.py diff --git a/src/leap/soledad/client/_db/adbapi.py b/src/leap/soledad/client/_db/adbapi.py new file mode 100644 index 00000000..5c28d108 --- /dev/null +++ b/src/leap/soledad/client/_db/adbapi.py @@ -0,0 +1,298 @@ +# -*- coding: utf-8 -*- +# adbapi.py +# Copyright (C) 2013, 2014 LEAP +# +# This program is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. +# +# This program is distributed in the hope that it will be useful, +# but WITHOUT ANY WARRANTY; without even the implied warranty of +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +# GNU General Public License for more details. +# +# You should have received a copy of the GNU General Public License +# along with this program. If not, see <http://www.gnu.org/licenses/>. +""" +An asyncrhonous interface to soledad using sqlcipher backend. +It uses twisted.enterprise.adbapi. +""" +import re +import sys + +from functools import partial + +from twisted.enterprise import adbapi +from twisted.internet.defer import DeferredSemaphore +from twisted.python import compat +from zope.proxy import ProxyBase, setProxiedObject + +from leap.soledad.common.log import getLogger +from leap.soledad.common.errors import DatabaseAccessError + +from . import sqlcipher +from . import pragmas + +if sys.version_info[0] < 3: + from pysqlcipher import dbapi2 +else: + from pysqlcipher3 import dbapi2 + + +logger = getLogger(__name__) + + +""" +How long the SQLCipher connection should wait for the lock to go away until +raising an exception. +""" +SQLCIPHER_CONNECTION_TIMEOUT = 10 + +""" +How many times a SQLCipher query should be retried in case of timeout. +""" +SQLCIPHER_MAX_RETRIES = 20 + + +def getConnectionPool(opts, openfun=None, driver="pysqlcipher"): + """ + Return a connection pool. + + :param opts: + Options for the SQLCipher connection. + :type opts: SQLCipherOptions + :param openfun: + Callback invoked after every connect() on the underlying DB-API + object. + :type openfun: callable + :param driver: + The connection driver. + :type driver: str + + :return: A U1DB connection pool. + :rtype: U1DBConnectionPool + """ + if openfun is None and driver == "pysqlcipher": + openfun = partial(pragmas.set_init_pragmas, opts=opts) + return U1DBConnectionPool( + opts, + # the following params are relayed "as is" to twisted's + # ConnectionPool. + "%s.dbapi2" % driver, opts.path, timeout=SQLCIPHER_CONNECTION_TIMEOUT, + check_same_thread=False, cp_openfun=openfun) + + +class U1DBConnection(adbapi.Connection): + """ + A wrapper for a U1DB connection instance. + """ + + u1db_wrapper = sqlcipher.SoledadSQLCipherWrapper + """ + The U1DB wrapper to use. + """ + + def __init__(self, pool, init_u1db=False): + """ + :param pool: The pool of connections to that owns this connection. + :type pool: adbapi.ConnectionPool + :param init_u1db: Wether the u1db database should be initialized. + :type init_u1db: bool + """ + self.init_u1db = init_u1db + try: + adbapi.Connection.__init__(self, pool) + except dbapi2.DatabaseError as e: + raise DatabaseAccessError( + 'Error initializing connection to sqlcipher database: %s' + % str(e)) + + def reconnect(self): + """ + Reconnect to the U1DB database. + """ + if self._connection is not None: + self._pool.disconnect(self._connection) + self._connection = self._pool.connect() + + if self.init_u1db: + self._u1db = self.u1db_wrapper( + self._connection, + self._pool.opts) + + def __getattr__(self, name): + """ + Route the requested attribute either to the U1DB wrapper or to the + connection. + + :param name: The name of the attribute. + :type name: str + """ + if name.startswith('u1db_'): + attr = re.sub('^u1db_', '', name) + return getattr(self._u1db, attr) + else: + return getattr(self._connection, name) + + +class U1DBTransaction(adbapi.Transaction): + """ + A wrapper for a U1DB 'cursor' object. + """ + + def __getattr__(self, name): + """ + Route the requested attribute either to the U1DB wrapper of the + connection or to the actual connection cursor. + + :param name: The name of the attribute. + :type name: str + """ + if name.startswith('u1db_'): + attr = re.sub('^u1db_', '', name) + return getattr(self._connection._u1db, attr) + else: + return getattr(self._cursor, name) + + +class U1DBConnectionPool(adbapi.ConnectionPool): + """ + Represent a pool of connections to an U1DB database. + """ + + connectionFactory = U1DBConnection + transactionFactory = U1DBTransaction + + def __init__(self, opts, *args, **kwargs): + """ + Initialize the connection pool. + """ + self.opts = opts + try: + adbapi.ConnectionPool.__init__(self, *args, **kwargs) + except dbapi2.DatabaseError as e: + raise DatabaseAccessError( + 'Error initializing u1db connection pool: %s' % str(e)) + + # all u1db connections, hashed by thread-id + self._u1dbconnections = {} + + # The replica uid, primed by the connections on init. + self.replica_uid = ProxyBase(None) + + try: + conn = self.connectionFactory( + self, init_u1db=True) + replica_uid = conn._u1db._real_replica_uid + setProxiedObject(self.replica_uid, replica_uid) + except DatabaseAccessError as e: + self.threadpool.stop() + raise DatabaseAccessError( + "Error initializing connection factory: %s" % str(e)) + + def runU1DBQuery(self, meth, *args, **kw): + """ + Execute a U1DB query in a thread, using a pooled connection. + + Concurrent threads trying to update the same database may timeout + because of other threads holding the database lock. Because of this, + we will retry SQLCIPHER_MAX_RETRIES times and fail after that. + + :param meth: The U1DB wrapper method name. + :type meth: str + + :return: a Deferred which will fire the return value of + 'self._runU1DBQuery(Transaction(...), *args, **kw)', or a Failure. + :rtype: twisted.internet.defer.Deferred + """ + meth = "u1db_%s" % meth + semaphore = DeferredSemaphore(SQLCIPHER_MAX_RETRIES) + + def _run_interaction(): + return self.runInteraction( + self._runU1DBQuery, meth, *args, **kw) + + def _errback(failure): + failure.trap(dbapi2.OperationalError) + if failure.getErrorMessage() == "database is locked": + logger.warn("database operation timed out") + should_retry = semaphore.acquire() + if should_retry: + logger.warn("trying again...") + return _run_interaction() + logger.warn("giving up!") + return failure + + d = _run_interaction() + d.addErrback(_errback) + return d + + def _runU1DBQuery(self, trans, meth, *args, **kw): + """ + Execute a U1DB query. + + :param trans: An U1DB transaction. + :type trans: adbapi.Transaction + :param meth: the U1DB wrapper method name. + :type meth: str + """ + meth = getattr(trans, meth) + return meth(*args, **kw) + # XXX should return a fetchall? + + # XXX add _runOperation too + + def _runInteraction(self, interaction, *args, **kw): + """ + Interact with the database and return the result. + + :param interaction: + A callable object whose first argument is an + L{adbapi.Transaction}. + :type interaction: callable + :return: a Deferred which will fire the return value of + 'interaction(Transaction(...), *args, **kw)', or a Failure. + :rtype: twisted.internet.defer.Deferred + """ + tid = self.threadID() + u1db = self._u1dbconnections.get(tid) + conn = self.connectionFactory( + self, init_u1db=not bool(u1db)) + + if self.replica_uid is None: + replica_uid = conn._u1db._real_replica_uid + setProxiedObject(self.replica_uid, replica_uid) + + if u1db is None: + self._u1dbconnections[tid] = conn._u1db + else: + conn._u1db = u1db + + trans = self.transactionFactory(self, conn) + try: + result = interaction(trans, *args, **kw) + trans.close() + conn.commit() + return result + except: + excType, excValue, excTraceback = sys.exc_info() + try: + conn.rollback() + except: + logger.error(None, "Rollback failed") + compat.reraise(excValue, excTraceback) + + def finalClose(self): + """ + A final close, only called by the shutdown trigger. + """ + self.shutdownID = None + if self.threadpool.started: + self.threadpool.stop() + self.running = False + for conn in self.connections.values(): + self._close(conn) + for u1db in self._u1dbconnections.values(): + self._close(u1db) + self.connections.clear() diff --git a/src/leap/soledad/client/_db/blobs.py b/src/leap/soledad/client/_db/blobs.py new file mode 100644 index 00000000..10b90c71 --- /dev/null +++ b/src/leap/soledad/client/_db/blobs.py @@ -0,0 +1,554 @@ +# -*- coding: utf-8 -*- +# _blobs.py +# Copyright (C) 2017 LEAP +# +# This program is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. +# +# This program is distributed in the hope that it will be useful, +# but WITHOUT ANY WARRANTY; without even the implied warranty of +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +# GNU General Public License for more details. +# +# You should have received a copy of the GNU General Public License +# along with this program. If not, see <http://www.gnu.org/licenses/>. +""" +Clientside BlobBackend Storage. +""" + +from urlparse import urljoin + +import binascii +import os +import base64 + +from io import BytesIO +from functools import partial + +from twisted.logger import Logger +from twisted.enterprise import adbapi +from twisted.internet import defer +from twisted.web.client import FileBodyProducer + +import treq + +from leap.soledad.common.errors import SoledadError +from leap.common.files import mkdir_p + +from .._document import BlobDoc +from .._crypto import DocInfo +from .._crypto import BlobEncryptor +from .._crypto import BlobDecryptor +from .._http import HTTPClient +from .._pipes import TruncatedTailPipe +from .._pipes import PreamblePipe + +from . import pragmas +from . import sqlcipher + + +logger = Logger() +FIXED_REV = 'ImmutableRevision' # Blob content is immutable + + +class BlobAlreadyExistsError(SoledadError): + pass + + +class ConnectionPool(adbapi.ConnectionPool): + + def insertAndGetLastRowid(self, *args, **kwargs): + """ + Execute an SQL query and return the last rowid. + + See: https://sqlite.org/c3ref/last_insert_rowid.html + """ + return self.runInteraction( + self._insertAndGetLastRowid, *args, **kwargs) + + def _insertAndGetLastRowid(self, trans, *args, **kw): + trans.execute(*args, **kw) + return trans.lastrowid + + def blob(self, table, column, irow, flags): + """ + Open a BLOB for incremental I/O. + + Return a handle to the BLOB that would be selected by: + + SELECT column FROM table WHERE rowid = irow; + + See: https://sqlite.org/c3ref/blob_open.html + + :param table: The table in which to lookup the blob. + :type table: str + :param column: The column where the BLOB is located. + :type column: str + :param rowid: The rowid of the BLOB. + :type rowid: int + :param flags: If zero, BLOB is opened for read-only. If non-zero, + BLOB is opened for RW. + :type flags: int + + :return: A BLOB handle. + :rtype: pysqlcipher.dbapi.Blob + """ + return self.runInteraction(self._blob, table, column, irow, flags) + + def _blob(self, trans, table, column, irow, flags): + # TODO: should not use transaction private variable here + handle = trans._connection.blob(table, column, irow, flags) + return handle + + +def check_http_status(code): + if code == 409: + raise BlobAlreadyExistsError() + elif code != 200: + raise SoledadError("Server Error") + + +class DecrypterBuffer(object): + + def __init__(self, blob_id, secret, tag): + self.doc_info = DocInfo(blob_id, FIXED_REV) + self.secret = secret + self.tag = tag + self.preamble_pipe = PreamblePipe(self._make_decryptor) + + def _make_decryptor(self, preamble): + self.decrypter = BlobDecryptor( + self.doc_info, preamble, + secret=self.secret, + armor=False, + start_stream=False, + tag=self.tag) + return TruncatedTailPipe(self.decrypter, tail_size=len(self.tag)) + + def write(self, data): + self.preamble_pipe.write(data) + + def close(self): + real_size = self.decrypter.decrypted_content_size + return self.decrypter._end_stream(), real_size + + +class BlobManager(object): + """ + Ideally, the decrypting flow goes like this: + + - GET a blob from remote server. + - Decrypt the preamble + - Allocate a zeroblob in the sqlcipher sink + - Mark the blob as unusable (ie, not verified) + - Decrypt the payload incrementally, and write chunks to sqlcipher + ** Is it possible to use a small buffer for the aes writer w/o + ** allocating all the memory in openssl? + - Finalize the AES decryption + - If preamble + payload verifies correctly, mark the blob as usable + + """ + + def __init__( + self, local_path, remote, key, secret, user, token=None, + cert_file=None): + if local_path: + mkdir_p(os.path.dirname(local_path)) + self.local = SQLiteBlobBackend(local_path, key) + self.remote = remote + self.secret = secret + self.user = user + self._client = HTTPClient(user, token, cert_file) + + def close(self): + if hasattr(self, 'local') and self.local: + return self.local.close() + + @defer.inlineCallbacks + def remote_list(self): + uri = urljoin(self.remote, self.user + '/') + data = yield self._client.get(uri) + defer.returnValue((yield data.json())) + + def local_list(self): + return self.local.list() + + @defer.inlineCallbacks + def send_missing(self): + our_blobs = yield self.local_list() + server_blobs = yield self.remote_list() + missing = [b_id for b_id in our_blobs if b_id not in server_blobs] + logger.info("Amount of documents missing on server: %s" % len(missing)) + # TODO: Send concurrently when we are able to stream directly from db + for blob_id in missing: + fd = yield self.local.get(blob_id) + logger.info("Upload local blob: %s" % blob_id) + yield self._encrypt_and_upload(blob_id, fd) + + @defer.inlineCallbacks + def fetch_missing(self): + # TODO: Use something to prioritize user requests over general new docs + our_blobs = yield self.local_list() + server_blobs = yield self.remote_list() + docs_we_want = [b_id for b_id in server_blobs if b_id not in our_blobs] + logger.info("Fetching new docs from server: %s" % len(docs_we_want)) + # TODO: Fetch concurrently when we are able to stream directly into db + for blob_id in docs_we_want: + logger.info("Fetching new doc: %s" % blob_id) + yield self.get(blob_id) + + @defer.inlineCallbacks + def put(self, doc, size): + if (yield self.local.exists(doc.blob_id)): + error_message = "Blob already exists: %s" % doc.blob_id + raise BlobAlreadyExistsError(error_message) + fd = doc.blob_fd + # TODO this is a tee really, but ok... could do db and upload + # concurrently. not sure if we'd gain something. + yield self.local.put(doc.blob_id, fd, size=size) + # In fact, some kind of pipe is needed here, where each write on db + # handle gets forwarded into a write on the connection handle + fd = yield self.local.get(doc.blob_id) + yield self._encrypt_and_upload(doc.blob_id, fd) + + @defer.inlineCallbacks + def get(self, blob_id): + local_blob = yield self.local.get(blob_id) + if local_blob: + logger.info("Found blob in local database: %s" % blob_id) + defer.returnValue(local_blob) + + result = yield self._download_and_decrypt(blob_id) + + if not result: + defer.returnValue(None) + blob, size = result + + if blob: + logger.info("Got decrypted blob of type: %s" % type(blob)) + blob.seek(0) + yield self.local.put(blob_id, blob, size=size) + defer.returnValue((yield self.local.get(blob_id))) + else: + # XXX we shouldn't get here, but we will... + # lots of ugly error handling possible: + # 1. retry, might be network error + # 2. try later, maybe didn't finished streaming + # 3.. resignation, might be error while verifying + logger.error('sorry, dunno what happened') + + @defer.inlineCallbacks + def _encrypt_and_upload(self, blob_id, fd): + # TODO ------------------------------------------ + # this is wrong, is doing 2 stages. + # the crypto producer can be passed to + # the uploader and react as data is written. + # try to rewrite as a tube: pass the fd to aes and let aes writer + # produce data to the treq request fd. + # ------------------------------------------------ + logger.info("Staring upload of blob: %s" % blob_id) + doc_info = DocInfo(blob_id, FIXED_REV) + uri = urljoin(self.remote, self.user + "/" + blob_id) + crypter = BlobEncryptor(doc_info, fd, secret=self.secret, + armor=False) + fd = yield crypter.encrypt() + response = yield self._client.put(uri, data=fd) + check_http_status(response.code) + logger.info("Finished upload: %s" % (blob_id,)) + + @defer.inlineCallbacks + def _download_and_decrypt(self, blob_id): + logger.info("Staring download of blob: %s" % blob_id) + # TODO this needs to be connected in a tube + uri = urljoin(self.remote, self.user + '/' + blob_id) + data = yield self._client.get(uri) + + if data.code == 404: + logger.warn("Blob not found in server: %s" % blob_id) + defer.returnValue(None) + elif not data.headers.hasHeader('Tag'): + logger.error("Server didn't send a tag header for: %s" % blob_id) + defer.returnValue(None) + tag = data.headers.getRawHeaders('Tag')[0] + tag = base64.urlsafe_b64decode(tag) + buf = DecrypterBuffer(blob_id, self.secret, tag) + + # incrementally collect the body of the response + yield treq.collect(data, buf.write) + fd, size = buf.close() + logger.info("Finished download: (%s, %d)" % (blob_id, size)) + defer.returnValue((fd, size)) + + @defer.inlineCallbacks + def delete(self, blob_id): + logger.info("Staring deletion of blob: %s" % blob_id) + yield self._delete_from_remote(blob_id) + if (yield self.local.exists(blob_id)): + yield self.local.delete(blob_id) + + def _delete_from_remote(self, blob_id): + # TODO this needs to be connected in a tube + uri = urljoin(self.remote, self.user + '/' + blob_id) + return self._client.delete(uri) + + +class SQLiteBlobBackend(object): + + def __init__(self, path, key=None): + self.path = os.path.abspath( + os.path.join(path, 'soledad_blob.db')) + mkdir_p(os.path.dirname(self.path)) + if not key: + raise ValueError('key cannot be None') + backend = 'pysqlcipher.dbapi2' + opts = sqlcipher.SQLCipherOptions( + '/tmp/ignored', binascii.b2a_hex(key), + is_raw_key=True, create=True) + pragmafun = partial(pragmas.set_init_pragmas, opts=opts) + openfun = _sqlcipherInitFactory(pragmafun) + + self.dbpool = ConnectionPool( + backend, self.path, check_same_thread=False, timeout=5, + cp_openfun=openfun, cp_min=1, cp_max=2, cp_name='blob_pool') + + def close(self): + from twisted._threads import AlreadyQuit + try: + self.dbpool.close() + except AlreadyQuit: + pass + + @defer.inlineCallbacks + def put(self, blob_id, blob_fd, size=None): + logger.info("Saving blob in local database...") + insert = 'INSERT INTO blobs (blob_id, payload) VALUES (?, zeroblob(?))' + irow = yield self.dbpool.insertAndGetLastRowid(insert, (blob_id, size)) + handle = yield self.dbpool.blob('blobs', 'payload', irow, 1) + blob_fd.seek(0) + # XXX I have to copy the buffer here so that I'm able to + # return a non-closed file to the caller (blobmanager.get) + # FIXME should remove this duplication! + # have a look at how treq does cope with closing the handle + # for uploading a file + producer = FileBodyProducer(blob_fd) + done = yield producer.startProducing(handle) + logger.info("Finished saving blob in local database.") + defer.returnValue(done) + + @defer.inlineCallbacks + def get(self, blob_id): + # TODO we can also stream the blob value using sqlite + # incremental interface for blobs - and just return the raw fd instead + select = 'SELECT payload FROM blobs WHERE blob_id = ?' + result = yield self.dbpool.runQuery(select, (blob_id,)) + if result: + defer.returnValue(BytesIO(str(result[0][0]))) + + @defer.inlineCallbacks + def list(self): + query = 'select blob_id from blobs' + result = yield self.dbpool.runQuery(query) + if result: + defer.returnValue([b_id[0] for b_id in result]) + else: + defer.returnValue([]) + + @defer.inlineCallbacks + def exists(self, blob_id): + query = 'SELECT blob_id from blobs WHERE blob_id = ?' + result = yield self.dbpool.runQuery(query, (blob_id,)) + defer.returnValue(bool(len(result))) + + def delete(self, blob_id): + query = 'DELETE FROM blobs WHERE blob_id = ?' + return self.dbpool.runQuery(query, (blob_id,)) + + +def _init_blob_table(conn): + maybe_create = ( + "CREATE TABLE IF NOT EXISTS " + "blobs (" + "blob_id PRIMARY KEY, " + "payload BLOB)") + conn.execute(maybe_create) + + +def _sqlcipherInitFactory(fun): + def _initialize(conn): + fun(conn) + _init_blob_table(conn) + return _initialize + + +# +# testing facilities +# + +@defer.inlineCallbacks +def testit(reactor): + # configure logging to stdout + from twisted.python import log + import sys + log.startLogging(sys.stdout) + + # parse command line arguments + import argparse + + parser = argparse.ArgumentParser() + parser.add_argument('--url', default='http://localhost:9000/') + parser.add_argument('--path', default='/tmp/blobs') + parser.add_argument('--secret', default='secret') + parser.add_argument('--uuid', default='user') + parser.add_argument('--token', default=None) + parser.add_argument('--cert-file', default='') + + subparsers = parser.add_subparsers(help='sub-command help', dest='action') + + # parse upload command + parser_upload = subparsers.add_parser( + 'upload', help='upload blob and bypass local db') + parser_upload.add_argument('payload') + parser_upload.add_argument('blob_id') + + # parse download command + parser_download = subparsers.add_parser( + 'download', help='download blob and bypass local db') + parser_download.add_argument('blob_id') + parser_download.add_argument('--output-file', default='/tmp/incoming-file') + + # parse put command + parser_put = subparsers.add_parser( + 'put', help='put blob in local db and upload') + parser_put.add_argument('payload') + parser_put.add_argument('blob_id') + + # parse get command + parser_get = subparsers.add_parser( + 'get', help='get blob from local db, get if needed') + parser_get.add_argument('blob_id') + + # parse delete command + parser_get = subparsers.add_parser( + 'delete', help='delete blob from local and remote db') + parser_get.add_argument('blob_id') + + # parse list command + parser_get = subparsers.add_parser( + 'list', help='list local and remote blob ids') + + # parse send_missing command + parser_get = subparsers.add_parser( + 'send_missing', help='send all pending upload blobs') + + # parse send_missing command + parser_get = subparsers.add_parser( + 'fetch_missing', help='fetch all new server blobs') + + # parse arguments + args = parser.parse_args() + + # TODO convert these into proper unittests + + def _manager(): + mkdir_p(os.path.dirname(args.path)) + manager = BlobManager( + args.path, args.url, + 'A' * 32, args.secret, + args.uuid, args.token, args.cert_file) + return manager + + @defer.inlineCallbacks + def _upload(blob_id, payload): + logger.info(":: Starting upload only: %s" % str((blob_id, payload))) + manager = _manager() + with open(payload, 'r') as fd: + yield manager._encrypt_and_upload(blob_id, fd) + logger.info(":: Finished upload only: %s" % str((blob_id, payload))) + + @defer.inlineCallbacks + def _download(blob_id): + logger.info(":: Starting download only: %s" % blob_id) + manager = _manager() + result = yield manager._download_and_decrypt(blob_id) + logger.info(":: Result of download: %s" % str(result)) + if result: + fd, _ = result + with open(args.output_file, 'w') as f: + logger.info(":: Writing data to %s" % args.output_file) + f.write(fd.read()) + logger.info(":: Finished download only: %s" % blob_id) + + @defer.inlineCallbacks + def _put(blob_id, payload): + logger.info(":: Starting full put: %s" % blob_id) + manager = _manager() + size = os.path.getsize(payload) + with open(payload) as fd: + doc = BlobDoc(fd, blob_id) + result = yield manager.put(doc, size=size) + logger.info(":: Result of put: %s" % str(result)) + logger.info(":: Finished full put: %s" % blob_id) + + @defer.inlineCallbacks + def _get(blob_id): + logger.info(":: Starting full get: %s" % blob_id) + manager = _manager() + fd = yield manager.get(blob_id) + if fd: + logger.info(":: Result of get: " + fd.getvalue()) + logger.info(":: Finished full get: %s" % blob_id) + + @defer.inlineCallbacks + def _delete(blob_id): + logger.info(":: Starting deletion of: %s" % blob_id) + manager = _manager() + yield manager.delete(blob_id) + logger.info(":: Finished deletion of: %s" % blob_id) + + @defer.inlineCallbacks + def _list(): + logger.info(":: Listing local blobs") + manager = _manager() + local_list = yield manager.local_list() + logger.info(":: Local list: %s" % local_list) + logger.info(":: Listing remote blobs") + remote_list = yield manager.remote_list() + logger.info(":: Remote list: %s" % remote_list) + + @defer.inlineCallbacks + def _send_missing(): + logger.info(":: Sending local pending upload docs") + manager = _manager() + yield manager.send_missing() + logger.info(":: Finished sending missing docs") + + @defer.inlineCallbacks + def _fetch_missing(): + logger.info(":: Fetching remote new docs") + manager = _manager() + yield manager.fetch_missing() + logger.info(":: Finished fetching new docs") + + if args.action == 'upload': + yield _upload(args.blob_id, args.payload) + elif args.action == 'download': + yield _download(args.blob_id) + elif args.action == 'put': + yield _put(args.blob_id, args.payload) + elif args.action == 'get': + yield _get(args.blob_id) + elif args.action == 'delete': + yield _delete(args.blob_id) + elif args.action == 'list': + yield _list() + elif args.action == 'send_missing': + yield _send_missing() + elif args.action == 'fetch_missing': + yield _fetch_missing() + + +if __name__ == '__main__': + from twisted.internet.task import react + react(testit) diff --git a/src/leap/soledad/client/_db/dbschema.sql b/src/leap/soledad/client/_db/dbschema.sql new file mode 100644 index 00000000..ae027fc5 --- /dev/null +++ b/src/leap/soledad/client/_db/dbschema.sql @@ -0,0 +1,42 @@ +-- Database schema +CREATE TABLE transaction_log ( + generation INTEGER PRIMARY KEY AUTOINCREMENT, + doc_id TEXT NOT NULL, + transaction_id TEXT NOT NULL +); +CREATE TABLE document ( + doc_id TEXT PRIMARY KEY, + doc_rev TEXT NOT NULL, + content TEXT +); +CREATE TABLE document_fields ( + doc_id TEXT NOT NULL, + field_name TEXT NOT NULL, + value TEXT +); +CREATE INDEX document_fields_field_value_doc_idx + ON document_fields(field_name, value, doc_id); + +CREATE TABLE sync_log ( + replica_uid TEXT PRIMARY KEY, + known_generation INTEGER, + known_transaction_id TEXT +); +CREATE TABLE conflicts ( + doc_id TEXT, + doc_rev TEXT, + content TEXT, + CONSTRAINT conflicts_pkey PRIMARY KEY (doc_id, doc_rev) +); +CREATE TABLE index_definitions ( + name TEXT, + offset INT, + field TEXT, + CONSTRAINT index_definitions_pkey PRIMARY KEY (name, offset) +); +create index index_definitions_field on index_definitions(field); +CREATE TABLE u1db_config ( + name TEXT PRIMARY KEY, + value TEXT +); +INSERT INTO u1db_config VALUES ('sql_schema', '0'); diff --git a/src/leap/soledad/client/_db/pragmas.py b/src/leap/soledad/client/_db/pragmas.py new file mode 100644 index 00000000..870ed63e --- /dev/null +++ b/src/leap/soledad/client/_db/pragmas.py @@ -0,0 +1,379 @@ +# -*- coding: utf-8 -*- +# pragmas.py +# Copyright (C) 2013, 2014 LEAP +# +# This program is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. +# +# This program is distributed in the hope that it will be useful, +# but WITHOUT ANY WARRANTY; without even the implied warranty of +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +# GNU General Public License for more details. +# +# You should have received a copy of the GNU General Public License +# along with this program. If not, see <http://www.gnu.org/licenses/>. +""" +Different pragmas used in the initialization of the SQLCipher database. +""" +import string +import threading +import os + +from leap.soledad.common import soledad_assert +from leap.soledad.common.log import getLogger + + +logger = getLogger(__name__) + + +_db_init_lock = threading.Lock() + + +def set_init_pragmas(conn, opts=None, extra_queries=None): + """ + Set the initialization pragmas. + + This includes the crypto pragmas, and any other options that must + be passed early to sqlcipher db. + """ + soledad_assert(opts is not None) + extra_queries = [] if extra_queries is None else extra_queries + with _db_init_lock: + # only one execution path should initialize the db + _set_init_pragmas(conn, opts, extra_queries) + + +def _set_init_pragmas(conn, opts, extra_queries): + + sync_off = os.environ.get('LEAP_SQLITE_NOSYNC') + memstore = os.environ.get('LEAP_SQLITE_MEMSTORE') + nowal = os.environ.get('LEAP_SQLITE_NOWAL') + + set_crypto_pragmas(conn, opts) + + if not nowal: + set_write_ahead_logging(conn) + if sync_off: + set_synchronous_off(conn) + else: + set_synchronous_normal(conn) + if memstore: + set_mem_temp_store(conn) + + for query in extra_queries: + conn.cursor().execute(query) + + +def set_crypto_pragmas(db_handle, sqlcipher_opts): + """ + Set cryptographic params (key, cipher, KDF number of iterations and + cipher page size). + + :param db_handle: + :type db_handle: + :param sqlcipher_opts: options for the SQLCipherDatabase + :type sqlcipher_opts: SQLCipherOpts instance + """ + # XXX assert CryptoOptions + opts = sqlcipher_opts + _set_key(db_handle, opts.key, opts.is_raw_key) + _set_cipher(db_handle, opts.cipher) + _set_kdf_iter(db_handle, opts.kdf_iter) + _set_cipher_page_size(db_handle, opts.cipher_page_size) + + +def _set_key(db_handle, key, is_raw_key): + """ + Set the ``key`` for use with the database. + + The process of creating a new, encrypted database is called 'keying' + the database. SQLCipher uses just-in-time key derivation at the point + it is first needed for an operation. This means that the key (and any + options) must be set before the first operation on the database. As + soon as the database is touched (e.g. SELECT, CREATE TABLE, UPDATE, + etc.) and pages need to be read or written, the key is prepared for + use. + + Implementation Notes: + + * PRAGMA key should generally be called as the first operation on a + database. + + :param key: The key for use with the database. + :type key: str + :param is_raw_key: + Whether C{key} is a raw 64-char hex string or a passphrase that should + be hashed to obtain the encyrption key. + :type is_raw_key: bool + """ + if is_raw_key: + _set_key_raw(db_handle, key) + else: + _set_key_passphrase(db_handle, key) + + +def _set_key_passphrase(db_handle, passphrase): + """ + Set a passphrase for encryption key derivation. + + The key itself can be a passphrase, which is converted to a key using + PBKDF2 key derivation. The result is used as the encryption key for + the database. By using this method, there is no way to alter the KDF; + if you want to do so you should use a raw key instead and derive the + key using your own KDF. + + :param db_handle: A handle to the SQLCipher database. + :type db_handle: pysqlcipher.Connection + :param passphrase: The passphrase used to derive the encryption key. + :type passphrase: str + """ + db_handle.cursor().execute("PRAGMA key = '%s'" % passphrase) + + +def _set_key_raw(db_handle, key): + """ + Set a raw hexadecimal encryption key. + + It is possible to specify an exact byte sequence using a blob literal. + With this method, it is the calling application's responsibility to + ensure that the data provided is a 64 character hex string, which will + be converted directly to 32 bytes (256 bits) of key data. + + :param db_handle: A handle to the SQLCipher database. + :type db_handle: pysqlcipher.Connection + :param key: A 64 character hex string. + :type key: str + """ + if not all(c in string.hexdigits for c in key): + raise NotAnHexString(key) + db_handle.cursor().execute('PRAGMA key = "x\'%s"' % key) + + +def _set_cipher(db_handle, cipher='aes-256-cbc'): + """ + Set the cipher and mode to use for symmetric encryption. + + SQLCipher uses aes-256-cbc as the default cipher and mode of + operation. It is possible to change this, though not generally + recommended, using PRAGMA cipher. + + SQLCipher makes direct use of libssl, so all cipher options available + to libssl are also available for use with SQLCipher. See `man enc` for + OpenSSL's supported ciphers. + + Implementation Notes: + + * PRAGMA cipher must be called after PRAGMA key and before the first + actual database operation or it will have no effect. + + * If a non-default value is used PRAGMA cipher to create a database, + it must also be called every time that database is opened. + + * SQLCipher does not implement its own encryption. Instead it uses the + widely available and peer-reviewed OpenSSL libcrypto for all + cryptographic functions. + + :param db_handle: A handle to the SQLCipher database. + :type db_handle: pysqlcipher.Connection + :param cipher: The cipher and mode to use. + :type cipher: str + """ + db_handle.cursor().execute("PRAGMA cipher = '%s'" % cipher) + + +def _set_kdf_iter(db_handle, kdf_iter=4000): + """ + Set the number of iterations for the key derivation function. + + SQLCipher uses PBKDF2 key derivation to strengthen the key and make it + resistent to brute force and dictionary attacks. The default + configuration uses 4000 PBKDF2 iterations (effectively 16,000 SHA1 + operations). PRAGMA kdf_iter can be used to increase or decrease the + number of iterations used. + + Implementation Notes: + + * PRAGMA kdf_iter must be called after PRAGMA key and before the first + actual database operation or it will have no effect. + + * If a non-default value is used PRAGMA kdf_iter to create a database, + it must also be called every time that database is opened. + + * It is not recommended to reduce the number of iterations if a + passphrase is in use. + + :param db_handle: A handle to the SQLCipher database. + :type db_handle: pysqlcipher.Connection + :param kdf_iter: The number of iterations to use. + :type kdf_iter: int + """ + db_handle.cursor().execute("PRAGMA kdf_iter = '%d'" % kdf_iter) + + +def _set_cipher_page_size(db_handle, cipher_page_size=1024): + """ + Set the page size of the encrypted database. + + SQLCipher 2 introduced the new PRAGMA cipher_page_size that can be + used to adjust the page size for the encrypted database. The default + page size is 1024 bytes, but it can be desirable for some applications + to use a larger page size for increased performance. For instance, + some recent testing shows that increasing the page size can noticeably + improve performance (5-30%) for certain queries that manipulate a + large number of pages (e.g. selects without an index, large inserts in + a transaction, big deletes). + + To adjust the page size, call the pragma immediately after setting the + key for the first time and each subsequent time that you open the + database. + + Implementation Notes: + + * PRAGMA cipher_page_size must be called after PRAGMA key and before + the first actual database operation or it will have no effect. + + * If a non-default value is used PRAGMA cipher_page_size to create a + database, it must also be called every time that database is opened. + + :param db_handle: A handle to the SQLCipher database. + :type db_handle: pysqlcipher.Connection + :param cipher_page_size: The page size. + :type cipher_page_size: int + """ + db_handle.cursor().execute( + "PRAGMA cipher_page_size = '%d'" % cipher_page_size) + + +# XXX UNUSED ? +def set_rekey(db_handle, new_key, is_raw_key): + """ + Change the key of an existing encrypted database. + + To change the key on an existing encrypted database, it must first be + unlocked with the current encryption key. Once the database is + readable and writeable, PRAGMA rekey can be used to re-encrypt every + page in the database with a new key. + + * PRAGMA rekey must be called after PRAGMA key. It can be called at any + time once the database is readable. + + * PRAGMA rekey can not be used to encrypted a standard SQLite + database! It is only useful for changing the key on an existing + database. + + * Previous versions of SQLCipher provided a PRAGMA rekey_cipher and + code>PRAGMA rekey_kdf_iter. These are deprecated and should not be + used. Instead, use sqlcipher_export(). + + :param db_handle: A handle to the SQLCipher database. + :type db_handle: pysqlcipher.Connection + :param new_key: The new key. + :type new_key: str + :param is_raw_key: Whether C{password} is a raw 64-char hex string or a + passphrase that should be hashed to obtain the encyrption + key. + :type is_raw_key: bool + """ + if is_raw_key: + _set_rekey_raw(db_handle, new_key) + else: + _set_rekey_passphrase(db_handle, new_key) + + +def _set_rekey_passphrase(db_handle, passphrase): + """ + Change the passphrase for encryption key derivation. + + The key itself can be a passphrase, which is converted to a key using + PBKDF2 key derivation. The result is used as the encryption key for + the database. + + :param db_handle: A handle to the SQLCipher database. + :type db_handle: pysqlcipher.Connection + :param passphrase: The passphrase used to derive the encryption key. + :type passphrase: str + """ + db_handle.cursor().execute("PRAGMA rekey = '%s'" % passphrase) + + +def _set_rekey_raw(db_handle, key): + """ + Change the raw hexadecimal encryption key. + + It is possible to specify an exact byte sequence using a blob literal. + With this method, it is the calling application's responsibility to + ensure that the data provided is a 64 character hex string, which will + be converted directly to 32 bytes (256 bits) of key data. + + :param db_handle: A handle to the SQLCipher database. + :type db_handle: pysqlcipher.Connection + :param key: A 64 character hex string. + :type key: str + """ + if not all(c in string.hexdigits for c in key): + raise NotAnHexString(key) + db_handle.cursor().execute('PRAGMA rekey = "x\'%s"' % key) + + +def set_synchronous_off(db_handle): + """ + Change the setting of the "synchronous" flag to OFF. + """ + logger.debug("sqlcipher: setting synchronous off") + db_handle.cursor().execute('PRAGMA synchronous=OFF') + + +def set_synchronous_normal(db_handle): + """ + Change the setting of the "synchronous" flag to NORMAL. + """ + logger.debug("sqlcipher: setting synchronous normal") + db_handle.cursor().execute('PRAGMA synchronous=NORMAL') + + +def set_mem_temp_store(db_handle): + """ + Use a in-memory store for temporary tables. + """ + logger.debug("sqlcipher: setting temp_store memory") + db_handle.cursor().execute('PRAGMA temp_store=MEMORY') + + +def set_write_ahead_logging(db_handle): + """ + Enable write-ahead logging, and set the autocheckpoint to 50 pages. + + Setting the autocheckpoint to a small value, we make the reads not + suffer too much performance degradation. + + From the sqlite docs: + + "There is a tradeoff between average read performance and average write + performance. To maximize the read performance, one wants to keep the + WAL as small as possible and hence run checkpoints frequently, perhaps + as often as every COMMIT. To maximize write performance, one wants to + amortize the cost of each checkpoint over as many writes as possible, + meaning that one wants to run checkpoints infrequently and let the WAL + grow as large as possible before each checkpoint. The decision of how + often to run checkpoints may therefore vary from one application to + another depending on the relative read and write performance + requirements of the application. The default strategy is to run a + checkpoint once the WAL reaches 1000 pages" + """ + logger.debug("sqlcipher: setting write-ahead logging") + db_handle.cursor().execute('PRAGMA journal_mode=WAL') + + # The optimum value can still use a little bit of tuning, but we favor + # small sizes of the WAL file to get fast reads, since we assume that + # the writes will be quick enough to not block too much. + + db_handle.cursor().execute('PRAGMA wal_autocheckpoint=50') + + +class NotAnHexString(Exception): + """ + Raised when trying to (raw) key the database with a non-hex string. + """ + pass diff --git a/src/leap/soledad/client/_db/sqlcipher.py b/src/leap/soledad/client/_db/sqlcipher.py new file mode 100644 index 00000000..d22017bd --- /dev/null +++ b/src/leap/soledad/client/_db/sqlcipher.py @@ -0,0 +1,633 @@ +# -*- coding: utf-8 -*- +# sqlcipher.py +# Copyright (C) 2013, 2014 LEAP +# +# This program is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. +# +# This program is distributed in the hope that it will be useful, +# but WITHOUT ANY WARRANTY; without even the implied warranty of +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +# GNU General Public License for more details. +# +# You should have received a copy of the GNU General Public License +# along with this program. If not, see <http://www.gnu.org/licenses/>. +""" +A U1DB backend that uses SQLCipher as its persistence layer. + +The SQLCipher API (http://sqlcipher.net/sqlcipher-api/) is fully implemented, +with the exception of the following statements: + + * PRAGMA cipher_use_hmac + * PRAGMA cipher_default_use_mac + +SQLCipher 2.0 introduced a per-page HMAC to validate that the page data has +not be tampered with. By default, when creating or opening a database using +SQLCipher 2, SQLCipher will attempt to use an HMAC check. This change in +database format means that SQLCipher 2 can't operate on version 1.1.x +databases by default. Thus, in order to provide backward compatibility with +SQLCipher 1.1.x, PRAGMA cipher_use_hmac can be used to disable the HMAC +functionality on specific databases. + +In some very specific cases, it is not possible to call PRAGMA cipher_use_hmac +as one of the first operations on a database. An example of this is when +trying to ATTACH a 1.1.x database to the main database. In these cases PRAGMA +cipher_default_use_hmac can be used to globally alter the default use of HMAC +when opening a database. + +So, as the statements above were introduced for backwards compatibility with +SQLCipher 1.1 databases, we do not implement them as all SQLCipher databases +handled by Soledad should be created by SQLCipher >= 2.0. +""" +import os +import sys + +from functools import partial + +from twisted.internet import reactor +from twisted.internet import defer +from twisted.enterprise import adbapi + +from leap.soledad.common.log import getLogger +from leap.soledad.common.l2db import errors as u1db_errors +from leap.soledad.common.errors import DatabaseAccessError + +from leap.soledad.client.http_target import SoledadHTTPSyncTarget +from leap.soledad.client.sync import SoledadSynchronizer + +from .._document import Document +from . import sqlite +from . import pragmas + +if sys.version_info[0] < 3: + from pysqlcipher import dbapi2 as sqlcipher_dbapi2 +else: + from pysqlcipher3 import dbapi2 as sqlcipher_dbapi2 + +logger = getLogger(__name__) + + +# Monkey-patch u1db.backends.sqlite with pysqlcipher.dbapi2 +sqlite.dbapi2 = sqlcipher_dbapi2 + + +# we may want to collect statistics from the sync process +DO_STATS = False +if os.environ.get('SOLEDAD_STATS'): + DO_STATS = True + + +def initialize_sqlcipher_db(opts, on_init=None, check_same_thread=True): + """ + Initialize a SQLCipher database. + + :param opts: + :type opts: SQLCipherOptions + :param on_init: a tuple of queries to be executed on initialization + :type on_init: tuple + :return: pysqlcipher.dbapi2.Connection + """ + # Note: There seemed to be a bug in sqlite 3.5.9 (with python2.6) + # where without re-opening the database on Windows, it + # doesn't see the transaction that was just committed + # Removing from here now, look at the pysqlite implementation if the + # bug shows up in windows. + + if not os.path.isfile(opts.path) and not opts.create: + raise u1db_errors.DatabaseDoesNotExist() + + conn = sqlcipher_dbapi2.connect( + opts.path, check_same_thread=check_same_thread) + pragmas.set_init_pragmas(conn, opts, extra_queries=on_init) + return conn + + +def initialize_sqlcipher_adbapi_db(opts, extra_queries=None): + from leap.soledad.client import sqlcipher_adbapi + return sqlcipher_adbapi.getConnectionPool( + opts, extra_queries=extra_queries) + + +class SQLCipherOptions(object): + """ + A container with options for the initialization of an SQLCipher database. + """ + + @classmethod + def copy(cls, source, path=None, key=None, create=None, + is_raw_key=None, cipher=None, kdf_iter=None, + cipher_page_size=None, sync_db_key=None): + """ + Return a copy of C{source} with parameters different than None + replaced by new values. + """ + local_vars = locals() + args = [] + kwargs = {} + + for name in ["path", "key"]: + val = local_vars[name] + if val is not None: + args.append(val) + else: + args.append(getattr(source, name)) + + for name in ["create", "is_raw_key", "cipher", "kdf_iter", + "cipher_page_size", "sync_db_key"]: + val = local_vars[name] + if val is not None: + kwargs[name] = val + else: + kwargs[name] = getattr(source, name) + + return SQLCipherOptions(*args, **kwargs) + + def __init__(self, path, key, create=True, is_raw_key=False, + cipher='aes-256-cbc', kdf_iter=4000, cipher_page_size=1024, + sync_db_key=None): + """ + :param path: The filesystem path for the database to open. + :type path: str + :param create: + True/False, should the database be created if it doesn't + already exist? + :param create: bool + :param is_raw_key: + Whether ``password`` is a raw 64-char hex string or a passphrase + that should be hashed to obtain the encyrption key. + :type raw_key: bool + :param cipher: The cipher and mode to use. + :type cipher: str + :param kdf_iter: The number of iterations to use. + :type kdf_iter: int + :param cipher_page_size: The page size. + :type cipher_page_size: int + """ + self.path = path + self.key = key + self.is_raw_key = is_raw_key + self.create = create + self.cipher = cipher + self.kdf_iter = kdf_iter + self.cipher_page_size = cipher_page_size + self.sync_db_key = sync_db_key + + def __str__(self): + """ + Return string representation of options, for easy debugging. + + :return: String representation of options. + :rtype: str + """ + attr_names = filter(lambda a: not a.startswith('_'), dir(self)) + attr_str = [] + for a in attr_names: + attr_str.append(a + "=" + str(getattr(self, a))) + name = self.__class__.__name__ + return "%s(%s)" % (name, ', '.join(attr_str)) + + +# +# The SQLCipher database +# + +class SQLCipherDatabase(sqlite.SQLitePartialExpandDatabase): + """ + A U1DB implementation that uses SQLCipher as its persistence layer. + """ + + # The attribute _index_storage_value will be used as the lookup key for the + # implementation of the SQLCipher storage backend. + _index_storage_value = 'expand referenced encrypted' + + def __init__(self, opts): + """ + Connect to an existing SQLCipher database, creating a new sqlcipher + database file if needed. + + *** IMPORTANT *** + + Don't forget to close the database after use by calling the close() + method otherwise some resources might not be freed and you may + experience several kinds of leakages. + + *** IMPORTANT *** + + :param opts: options for initialization of the SQLCipher database. + :type opts: SQLCipherOptions + """ + # ensure the db is encrypted if the file already exists + if os.path.isfile(opts.path): + self._db_handle = _assert_db_is_encrypted(opts) + else: + # connect to the sqlcipher database + self._db_handle = initialize_sqlcipher_db(opts) + + # TODO --------------------------------------------------- + # Everything else in this initialization has to be factored + # out, so it can be used from SoledadSQLCipherWrapper.__init__ + # too. + # --------------------------------------------------------- + + self._ensure_schema() + self.set_document_factory(doc_factory) + self._prime_replica_uid() + + def _prime_replica_uid(self): + """ + In the u1db implementation, _replica_uid is a property + that returns the value in _real_replica_uid, and does + a db query if no value found. + Here we prime the replica uid during initialization so + that we don't have to wait for the query afterwards. + """ + self._real_replica_uid = None + self._get_replica_uid() + + def _extra_schema_init(self, c): + """ + Add any extra fields, etc to the basic table definitions. + + This method is called by u1db.backends.sqlite_backend._initialize() + method, which is executed when the database schema is created. Here, + we use it to include the "syncable" property for LeapDocuments. + + :param c: The cursor for querying the database. + :type c: dbapi2.cursor + """ + c.execute( + 'ALTER TABLE document ' + 'ADD COLUMN syncable BOOL NOT NULL DEFAULT TRUE') + + # + # SQLCipher API methods + # + + # Extra query methods: extensions to the base u1db sqlite implmentation. + + def get_count_from_index(self, index_name, *key_values): + """ + Return the count for a given combination of index_name + and key values. + + Extension method made from similar methods in u1db version 13.09 + + :param index_name: The index to query + :type index_name: str + :param key_values: values to match. eg, if you have + an index with 3 fields then you would have: + get_from_index(index_name, val1, val2, val3) + :type key_values: tuple + :return: count. + :rtype: int + """ + c = self._db_handle.cursor() + definition = self._get_index_definition(index_name) + + if len(key_values) != len(definition): + raise u1db_errors.InvalidValueForIndex() + tables = ["document_fields d%d" % i for i in range(len(definition))] + novalue_where = ["d.doc_id = d%d.doc_id" + " AND d%d.field_name = ?" + % (i, i) for i in range(len(definition))] + exact_where = [novalue_where[i] + (" AND d%d.value = ?" % (i,)) + for i in range(len(definition))] + args = [] + where = [] + for idx, (field, value) in enumerate(zip(definition, key_values)): + args.append(field) + where.append(exact_where[idx]) + args.append(value) + + tables = ["document_fields d%d" % i for i in range(len(definition))] + statement = ( + "SELECT COUNT(*) FROM document d, %s WHERE %s " % ( + ', '.join(tables), + ' AND '.join(where), + )) + try: + c.execute(statement, tuple(args)) + except sqlcipher_dbapi2.OperationalError as e: + raise sqlcipher_dbapi2.OperationalError( + str(e) + '\nstatement: %s\nargs: %s\n' % (statement, args)) + res = c.fetchall() + return res[0][0] + + def close(self): + """ + Close db connections. + """ + # TODO should be handled by adbapi instead + # TODO syncdb should be stopped first + + if logger is not None: # logger might be none if called from __del__ + logger.debug("SQLCipher backend: closing") + + # close the actual database + if getattr(self, '_db_handle', False): + self._db_handle.close() + self._db_handle = None + + # indexes + + def _put_and_update_indexes(self, old_doc, doc): + """ + Update a document and all indexes related to it. + + :param old_doc: The old version of the document. + :type old_doc: u1db.Document + :param doc: The new version of the document. + :type doc: u1db.Document + """ + sqlite.SQLitePartialExpandDatabase._put_and_update_indexes( + self, old_doc, doc) + c = self._db_handle.cursor() + c.execute('UPDATE document SET syncable=? WHERE doc_id=?', + (doc.syncable, doc.doc_id)) + + def _get_doc(self, doc_id, check_for_conflicts=False): + """ + Get just the document content, without fancy handling. + + :param doc_id: The unique document identifier + :type doc_id: str + :param include_deleted: If set to True, deleted documents will be + returned with empty content. Otherwise asking for a deleted + document will return None. + :type include_deleted: bool + + :return: a Document object. + :type: u1db.Document + """ + doc = sqlite.SQLitePartialExpandDatabase._get_doc( + self, doc_id, check_for_conflicts) + if doc: + c = self._db_handle.cursor() + c.execute('SELECT syncable FROM document WHERE doc_id=?', + (doc.doc_id,)) + result = c.fetchone() + doc.syncable = bool(result[0]) + return doc + + def __del__(self): + """ + Free resources when deleting or garbage collecting the database. + + This is only here to minimze problems if someone ever forgets to call + the close() method after using the database; you should not rely on + garbage collecting to free up the database resources. + """ + self.close() + + +class SQLCipherU1DBSync(SQLCipherDatabase): + """ + Soledad syncer implementation. + """ + + """ + The name of the local symmetrically encrypted documents to + sync database file. + """ + LOCAL_SYMMETRIC_SYNC_FILE_NAME = 'sync.u1db' + + """ + Period or recurrence of the Looping Call that will do the encryption to the + syncdb (in seconds). + """ + ENCRYPT_LOOP_PERIOD = 1 + + def __init__(self, opts, soledad_crypto, replica_uid, cert_file): + self._opts = opts + self._path = opts.path + self._crypto = soledad_crypto + self.__replica_uid = replica_uid + self._cert_file = cert_file + + # storage for the documents received during a sync + self.received_docs = [] + + self.running = False + self._db_handle = None + + # initialize the main db before scheduling a start + self._initialize_main_db() + self._reactor = reactor + self._reactor.callWhenRunning(self._start) + + if DO_STATS: + self.sync_phase = None + + def commit(self): + self._db_handle.commit() + + @property + def _replica_uid(self): + return str(self.__replica_uid) + + def _start(self): + if not self.running: + self.running = True + + def _initialize_main_db(self): + try: + self._db_handle = initialize_sqlcipher_db( + self._opts, check_same_thread=False) + self._real_replica_uid = None + self._ensure_schema() + self.set_document_factory(doc_factory) + except sqlcipher_dbapi2.DatabaseError as e: + raise DatabaseAccessError(str(e)) + + @defer.inlineCallbacks + def sync(self, url, creds=None): + """ + Synchronize documents with remote replica exposed at url. + + It is not safe to initiate more than one sync process and let them run + concurrently. It is responsibility of the caller to ensure that there + are no concurrent sync processes running. This is currently controlled + by the main Soledad object because it may also run post-sync hooks, + which should be run while the lock is locked. + + :param url: The url of the target replica to sync with. + :type url: str + :param creds: optional dictionary giving credentials to authorize the + operation with the server. + :type creds: dict + + :return: + A Deferred, that will fire with the local generation (type `int`) + before the synchronisation was performed. + :rtype: Deferred + """ + syncer = self._get_syncer(url, creds=creds) + if DO_STATS: + self.sync_phase = syncer.sync_phase + self.syncer = syncer + self.sync_exchange_phase = syncer.sync_exchange_phase + local_gen_before_sync = yield syncer.sync() + self.received_docs = syncer.received_docs + defer.returnValue(local_gen_before_sync) + + def _get_syncer(self, url, creds=None): + """ + Get a synchronizer for ``url`` using ``creds``. + + :param url: The url of the target replica to sync with. + :type url: str + :param creds: optional dictionary giving credentials. + to authorize the operation with the server. + :type creds: dict + + :return: A synchronizer. + :rtype: Synchronizer + """ + return SoledadSynchronizer( + self, + SoledadHTTPSyncTarget( + url, + # XXX is the replica_uid ready? + self._replica_uid, + creds=creds, + crypto=self._crypto, + cert_file=self._cert_file)) + + # + # Symmetric encryption of syncing docs + # + + def get_generation(self): + # FIXME + # XXX this SHOULD BE a callback + return self._get_generation() + + +class U1DBSQLiteBackend(sqlite.SQLitePartialExpandDatabase): + """ + A very simple wrapper for u1db around sqlcipher backend. + + Instead of initializing the database on the fly, it just uses an existing + connection that is passed to it in the initializer. + + It can be used in tests and debug runs to initialize the adbapi with plain + sqlite connections, decoupled from the sqlcipher layer. + """ + + def __init__(self, conn): + self._db_handle = conn + self._real_replica_uid = None + self._ensure_schema() + self._factory = Document + + +class SoledadSQLCipherWrapper(SQLCipherDatabase): + """ + A wrapper for u1db that uses the Soledad-extended sqlcipher backend. + + Instead of initializing the database on the fly, it just uses an existing + connection that is passed to it in the initializer. + + It can be used from adbapi to initialize a soledad database after + getting a regular connection to a sqlcipher database. + """ + def __init__(self, conn, opts): + self._db_handle = conn + self._real_replica_uid = None + self._ensure_schema() + self.set_document_factory(doc_factory) + self._prime_replica_uid() + + +def _assert_db_is_encrypted(opts): + """ + Assert that the sqlcipher file contains an encrypted database. + + When opening an existing database, PRAGMA key will not immediately + throw an error if the key provided is incorrect. To test that the + database can be successfully opened with the provided key, it is + necessary to perform some operation on the database (i.e. read from + it) and confirm it is success. + + The easiest way to do this is select off the sqlite_master table, + which will attempt to read the first page of the database and will + parse the schema. + + :param opts: + """ + # We try to open an encrypted database with the regular u1db + # backend should raise a DatabaseError exception. + # If the regular backend succeeds, then we need to stop because + # the database was not properly initialized. + try: + sqlite.SQLitePartialExpandDatabase(opts.path) + except sqlcipher_dbapi2.DatabaseError: + # assert that we can access it using SQLCipher with the given + # key + dummy_query = ('SELECT count(*) FROM sqlite_master',) + return initialize_sqlcipher_db(opts, on_init=dummy_query) + else: + raise DatabaseIsNotEncrypted() + +# +# Exceptions +# + + +class DatabaseIsNotEncrypted(Exception): + """ + Exception raised when trying to open non-encrypted databases. + """ + pass + + +def doc_factory(doc_id=None, rev=None, json='{}', has_conflicts=False, + syncable=True): + """ + Return a default Soledad Document. + Used in the initialization for SQLCipherDatabase + """ + return Document(doc_id=doc_id, rev=rev, json=json, + has_conflicts=has_conflicts, syncable=syncable) + + +sqlite.SQLiteDatabase.register_implementation(SQLCipherDatabase) + + +# +# twisted.enterprise.adbapi SQLCipher implementation +# + +SQLCIPHER_CONNECTION_TIMEOUT = 10 + + +def getConnectionPool(opts, extra_queries=None): + openfun = partial( + pragmas.set_init_pragmas, + opts=opts, + extra_queries=extra_queries) + return SQLCipherConnectionPool( + database=opts.path, + check_same_thread=False, + cp_openfun=openfun, + timeout=SQLCIPHER_CONNECTION_TIMEOUT) + + +class SQLCipherConnection(adbapi.Connection): + pass + + +class SQLCipherTransaction(adbapi.Transaction): + pass + + +class SQLCipherConnectionPool(adbapi.ConnectionPool): + + connectionFactory = SQLCipherConnection + transactionFactory = SQLCipherTransaction + + def __init__(self, *args, **kwargs): + adbapi.ConnectionPool.__init__( + self, "pysqlcipher.dbapi2", *args, **kwargs) diff --git a/src/leap/soledad/client/_db/sqlite.py b/src/leap/soledad/client/_db/sqlite.py new file mode 100644 index 00000000..4f7b1259 --- /dev/null +++ b/src/leap/soledad/client/_db/sqlite.py @@ -0,0 +1,930 @@ +# Copyright 2011 Canonical Ltd. +# Copyright 2016 LEAP Encryption Access Project +# +# This file is part of u1db. +# +# u1db is free software: you can redistribute it and/or modify +# it under the terms of the GNU Lesser General Public License version 3 +# as published by the Free Software Foundation. +# +# u1db is distributed in the hope that it will be useful, +# but WITHOUT ANY WARRANTY; without even the implied warranty of +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +# GNU Lesser General Public License for more details. +# +# You should have received a copy of the GNU Lesser General Public License +# along with u1db. If not, see <http://www.gnu.org/licenses/>. + +""" +A L2DB implementation that uses SQLite as its persistence layer. +""" + +import errno +import os +import json +import sys +import time +import uuid +import pkg_resources + +from sqlite3 import dbapi2 + +from leap.soledad.common.l2db.backends import CommonBackend, CommonSyncTarget +from leap.soledad.common.l2db import ( + Document, errors, + query_parser, vectorclock) + + +class SQLiteDatabase(CommonBackend): + """A U1DB implementation that uses SQLite as its persistence layer.""" + + _sqlite_registry = {} + + def __init__(self, sqlite_file, document_factory=None): + """Create a new sqlite file.""" + self._db_handle = dbapi2.connect(sqlite_file) + self._real_replica_uid = None + self._ensure_schema() + self._factory = document_factory or Document + + def set_document_factory(self, factory): + self._factory = factory + + def get_sync_target(self): + return SQLiteSyncTarget(self) + + @classmethod + def _which_index_storage(cls, c): + try: + c.execute("SELECT value FROM u1db_config" + " WHERE name = 'index_storage'") + except dbapi2.OperationalError as e: + # The table does not exist yet + return None, e + else: + return c.fetchone()[0], None + + WAIT_FOR_PARALLEL_INIT_HALF_INTERVAL = 0.5 + + @classmethod + def _open_database(cls, sqlite_file, document_factory=None): + if not os.path.isfile(sqlite_file): + raise errors.DatabaseDoesNotExist() + tries = 2 + while True: + # Note: There seems to be a bug in sqlite 3.5.9 (with python2.6) + # where without re-opening the database on Windows, it + # doesn't see the transaction that was just committed + db_handle = dbapi2.connect(sqlite_file) + c = db_handle.cursor() + v, err = cls._which_index_storage(c) + db_handle.close() + if v is not None: + break + # possibly another process is initializing it, wait for it to be + # done + if tries == 0: + raise err # go for the richest error? + tries -= 1 + time.sleep(cls.WAIT_FOR_PARALLEL_INIT_HALF_INTERVAL) + return SQLiteDatabase._sqlite_registry[v]( + sqlite_file, document_factory=document_factory) + + @classmethod + def open_database(cls, sqlite_file, create, backend_cls=None, + document_factory=None): + try: + return cls._open_database( + sqlite_file, document_factory=document_factory) + except errors.DatabaseDoesNotExist: + if not create: + raise + if backend_cls is None: + # default is SQLitePartialExpandDatabase + backend_cls = SQLitePartialExpandDatabase + return backend_cls(sqlite_file, document_factory=document_factory) + + @staticmethod + def delete_database(sqlite_file): + try: + os.unlink(sqlite_file) + except OSError as ex: + if ex.errno == errno.ENOENT: + raise errors.DatabaseDoesNotExist() + raise + + @staticmethod + def register_implementation(klass): + """Register that we implement an SQLiteDatabase. + + The attribute _index_storage_value will be used as the lookup key. + """ + SQLiteDatabase._sqlite_registry[klass._index_storage_value] = klass + + def _get_sqlite_handle(self): + """Get access to the underlying sqlite database. + + This should only be used by the test suite, etc, for examining the + state of the underlying database. + """ + return self._db_handle + + def _close_sqlite_handle(self): + """Release access to the underlying sqlite database.""" + self._db_handle.close() + + def close(self): + self._close_sqlite_handle() + + def _is_initialized(self, c): + """Check if this database has been initialized.""" + c.execute("PRAGMA case_sensitive_like=ON") + try: + c.execute("SELECT value FROM u1db_config" + " WHERE name = 'sql_schema'") + except dbapi2.OperationalError: + # The table does not exist yet + val = None + else: + val = c.fetchone() + if val is not None: + return True + return False + + def _initialize(self, c): + """Create the schema in the database.""" + # read the script with sql commands + # TODO: Change how we set up the dependency. Most likely use something + # like lp:dirspec to grab the file from a common resource + # directory. Doesn't specifically need to be handled until we get + # to the point of packaging this. + schema_content = pkg_resources.resource_string( + __name__, 'dbschema.sql') + # Note: We'd like to use c.executescript() here, but it seems that + # executescript always commits, even if you set + # isolation_level = None, so if we want to properly handle + # exclusive locking and rollbacks between processes, we need + # to execute it line-by-line + for line in schema_content.split(';'): + if not line: + continue + c.execute(line) + # add extra fields + self._extra_schema_init(c) + # A unique identifier should be set for this replica. Implementations + # don't have to strictly use uuid here, but we do want the uid to be + # unique amongst all databases that will sync with each other. + # We might extend this to using something with hostname for easier + # debugging. + self._set_replica_uid_in_transaction(uuid.uuid4().hex) + c.execute("INSERT INTO u1db_config VALUES" " ('index_storage', ?)", + (self._index_storage_value,)) + + def _ensure_schema(self): + """Ensure that the database schema has been created.""" + old_isolation_level = self._db_handle.isolation_level + c = self._db_handle.cursor() + if self._is_initialized(c): + return + try: + # autocommit/own mgmt of transactions + self._db_handle.isolation_level = None + with self._db_handle: + # only one execution path should initialize the db + c.execute("begin exclusive") + if self._is_initialized(c): + return + self._initialize(c) + finally: + self._db_handle.isolation_level = old_isolation_level + + def _extra_schema_init(self, c): + """Add any extra fields, etc to the basic table definitions.""" + + def _parse_index_definition(self, index_field): + """Parse a field definition for an index, returning a Getter.""" + # Note: We may want to keep a Parser object around, and cache the + # Getter objects for a greater length of time. Specifically, if + # you create a bunch of indexes, and then insert 50k docs, you'll + # re-parse the indexes between puts. The time to insert the docs + # is still likely to dominate put_doc time, though. + parser = query_parser.Parser() + getter = parser.parse(index_field) + return getter + + def _update_indexes(self, doc_id, raw_doc, getters, db_cursor): + """Update document_fields for a single document. + + :param doc_id: Identifier for this document + :param raw_doc: The python dict representation of the document. + :param getters: A list of [(field_name, Getter)]. Getter.get will be + called to evaluate the index definition for this document, and the + results will be inserted into the db. + :param db_cursor: An sqlite Cursor. + :return: None + """ + values = [] + for field_name, getter in getters: + for idx_value in getter.get(raw_doc): + values.append((doc_id, field_name, idx_value)) + if values: + db_cursor.executemany( + "INSERT INTO document_fields VALUES (?, ?, ?)", values) + + def _set_replica_uid(self, replica_uid): + """Force the replica_uid to be set.""" + with self._db_handle: + self._set_replica_uid_in_transaction(replica_uid) + + def _set_replica_uid_in_transaction(self, replica_uid): + """Set the replica_uid. A transaction should already be held.""" + c = self._db_handle.cursor() + c.execute("INSERT OR REPLACE INTO u1db_config" + " VALUES ('replica_uid', ?)", + (replica_uid,)) + self._real_replica_uid = replica_uid + + def _get_replica_uid(self): + if self._real_replica_uid is not None: + return self._real_replica_uid + c = self._db_handle.cursor() + c.execute("SELECT value FROM u1db_config WHERE name = 'replica_uid'") + val = c.fetchone() + if val is None: + return None + self._real_replica_uid = val[0] + return self._real_replica_uid + + _replica_uid = property(_get_replica_uid) + + def _get_generation(self): + c = self._db_handle.cursor() + c.execute('SELECT max(generation) FROM transaction_log') + val = c.fetchone()[0] + if val is None: + return 0 + return val + + def _get_generation_info(self): + c = self._db_handle.cursor() + c.execute( + 'SELECT max(generation), transaction_id FROM transaction_log ') + val = c.fetchone() + if val[0] is None: + return(0, '') + return val + + def _get_trans_id_for_gen(self, generation): + if generation == 0: + return '' + c = self._db_handle.cursor() + c.execute( + 'SELECT transaction_id FROM transaction_log WHERE generation = ?', + (generation,)) + val = c.fetchone() + if val is None: + raise errors.InvalidGeneration + return val[0] + + def _get_transaction_log(self): + c = self._db_handle.cursor() + c.execute("SELECT doc_id, transaction_id FROM transaction_log" + " ORDER BY generation") + return c.fetchall() + + def _get_doc(self, doc_id, check_for_conflicts=False): + """Get just the document content, without fancy handling.""" + c = self._db_handle.cursor() + if check_for_conflicts: + c.execute( + "SELECT document.doc_rev, document.content, " + "count(conflicts.doc_rev) FROM document LEFT OUTER JOIN " + "conflicts ON conflicts.doc_id = document.doc_id WHERE " + "document.doc_id = ? GROUP BY document.doc_id, " + "document.doc_rev, document.content;", (doc_id,)) + else: + c.execute( + "SELECT doc_rev, content, 0 FROM document WHERE doc_id = ?", + (doc_id,)) + val = c.fetchone() + if val is None: + return None + doc_rev, content, conflicts = val + doc = self._factory(doc_id, doc_rev, content) + doc.has_conflicts = conflicts > 0 + return doc + + def _has_conflicts(self, doc_id): + c = self._db_handle.cursor() + c.execute("SELECT 1 FROM conflicts WHERE doc_id = ? LIMIT 1", + (doc_id,)) + val = c.fetchone() + if val is None: + return False + else: + return True + + def get_doc(self, doc_id, include_deleted=False): + doc = self._get_doc(doc_id, check_for_conflicts=True) + if doc is None: + return None + if doc.is_tombstone() and not include_deleted: + return None + return doc + + def get_all_docs(self, include_deleted=False): + """Get all documents from the database.""" + generation = self._get_generation() + results = [] + c = self._db_handle.cursor() + c.execute( + "SELECT document.doc_id, document.doc_rev, document.content, " + "count(conflicts.doc_rev) FROM document LEFT OUTER JOIN conflicts " + "ON conflicts.doc_id = document.doc_id GROUP BY document.doc_id, " + "document.doc_rev, document.content;") + rows = c.fetchall() + for doc_id, doc_rev, content, conflicts in rows: + if content is None and not include_deleted: + continue + doc = self._factory(doc_id, doc_rev, content) + doc.has_conflicts = conflicts > 0 + results.append(doc) + return (generation, results) + + def put_doc(self, doc): + if doc.doc_id is None: + raise errors.InvalidDocId() + self._check_doc_id(doc.doc_id) + self._check_doc_size(doc) + with self._db_handle: + old_doc = self._get_doc(doc.doc_id, check_for_conflicts=True) + if old_doc and old_doc.has_conflicts: + raise errors.ConflictedDoc() + if old_doc and doc.rev is None and old_doc.is_tombstone(): + new_rev = self._allocate_doc_rev(old_doc.rev) + else: + if old_doc is not None: + if old_doc.rev != doc.rev: + raise errors.RevisionConflict() + else: + if doc.rev is not None: + raise errors.RevisionConflict() + new_rev = self._allocate_doc_rev(doc.rev) + doc.rev = new_rev + self._put_and_update_indexes(old_doc, doc) + return new_rev + + def _expand_to_fields(self, doc_id, base_field, raw_doc, save_none): + """Convert a dict representation into named fields. + + So something like: {'key1': 'val1', 'key2': 'val2'} + gets converted into: [(doc_id, 'key1', 'val1', 0) + (doc_id, 'key2', 'val2', 0)] + :param doc_id: Just added to every record. + :param base_field: if set, these are nested keys, so each field should + be appropriately prefixed. + :param raw_doc: The python dictionary. + """ + # TODO: Handle lists + values = [] + for field_name, value in raw_doc.iteritems(): + if value is None and not save_none: + continue + if base_field: + full_name = base_field + '.' + field_name + else: + full_name = field_name + if value is None or isinstance(value, (int, float, basestring)): + values.append((doc_id, full_name, value, len(values))) + else: + subvalues = self._expand_to_fields(doc_id, full_name, value, + save_none) + for _, subfield_name, val, _ in subvalues: + values.append((doc_id, subfield_name, val, len(values))) + return values + + def _put_and_update_indexes(self, old_doc, doc): + """Actually insert a document into the database. + + This both updates the existing documents content, and any indexes that + refer to this document. + """ + raise NotImplementedError(self._put_and_update_indexes) + + def whats_changed(self, old_generation=0): + c = self._db_handle.cursor() + c.execute("SELECT generation, doc_id, transaction_id" + " FROM transaction_log" + " WHERE generation > ? ORDER BY generation DESC", + (old_generation,)) + results = c.fetchall() + cur_gen = old_generation + seen = set() + changes = [] + newest_trans_id = '' + for generation, doc_id, trans_id in results: + if doc_id not in seen: + changes.append((doc_id, generation, trans_id)) + seen.add(doc_id) + if changes: + cur_gen = changes[0][1] # max generation + newest_trans_id = changes[0][2] + changes.reverse() + else: + c.execute("SELECT generation, transaction_id" + " FROM transaction_log ORDER BY generation DESC LIMIT 1") + results = c.fetchone() + if not results: + cur_gen = 0 + newest_trans_id = '' + else: + cur_gen, newest_trans_id = results + + return cur_gen, newest_trans_id, changes + + def delete_doc(self, doc): + with self._db_handle: + old_doc = self._get_doc(doc.doc_id, check_for_conflicts=True) + if old_doc is None: + raise errors.DocumentDoesNotExist + if old_doc.rev != doc.rev: + raise errors.RevisionConflict() + if old_doc.is_tombstone(): + raise errors.DocumentAlreadyDeleted + if old_doc.has_conflicts: + raise errors.ConflictedDoc() + new_rev = self._allocate_doc_rev(doc.rev) + doc.rev = new_rev + doc.make_tombstone() + self._put_and_update_indexes(old_doc, doc) + return new_rev + + def _get_conflicts(self, doc_id): + c = self._db_handle.cursor() + c.execute("SELECT doc_rev, content FROM conflicts WHERE doc_id = ?", + (doc_id,)) + return [self._factory(doc_id, doc_rev, content) + for doc_rev, content in c.fetchall()] + + def get_doc_conflicts(self, doc_id): + with self._db_handle: + conflict_docs = self._get_conflicts(doc_id) + if not conflict_docs: + return [] + this_doc = self._get_doc(doc_id) + this_doc.has_conflicts = True + return [this_doc] + conflict_docs + + def _get_replica_gen_and_trans_id(self, other_replica_uid): + c = self._db_handle.cursor() + c.execute("SELECT known_generation, known_transaction_id FROM sync_log" + " WHERE replica_uid = ?", + (other_replica_uid,)) + val = c.fetchone() + if val is None: + other_gen = 0 + trans_id = '' + else: + other_gen = val[0] + trans_id = val[1] + return other_gen, trans_id + + def _set_replica_gen_and_trans_id(self, other_replica_uid, + other_generation, other_transaction_id): + with self._db_handle: + self._do_set_replica_gen_and_trans_id( + other_replica_uid, other_generation, other_transaction_id) + + def _do_set_replica_gen_and_trans_id(self, other_replica_uid, + other_generation, + other_transaction_id): + c = self._db_handle.cursor() + c.execute("INSERT OR REPLACE INTO sync_log VALUES (?, ?, ?)", + (other_replica_uid, other_generation, + other_transaction_id)) + + def _put_doc_if_newer(self, doc, save_conflict, replica_uid=None, + replica_gen=None, replica_trans_id=None): + return super(SQLiteDatabase, self)._put_doc_if_newer( + doc, + save_conflict=save_conflict, + replica_uid=replica_uid, replica_gen=replica_gen, + replica_trans_id=replica_trans_id) + + def _add_conflict(self, c, doc_id, my_doc_rev, my_content): + c.execute("INSERT INTO conflicts VALUES (?, ?, ?)", + (doc_id, my_doc_rev, my_content)) + + def _delete_conflicts(self, c, doc, conflict_revs): + deleting = [(doc.doc_id, c_rev) for c_rev in conflict_revs] + c.executemany("DELETE FROM conflicts" + " WHERE doc_id=? AND doc_rev=?", deleting) + doc.has_conflicts = self._has_conflicts(doc.doc_id) + + def _prune_conflicts(self, doc, doc_vcr): + if self._has_conflicts(doc.doc_id): + autoresolved = False + c_revs_to_prune = [] + for c_doc in self._get_conflicts(doc.doc_id): + c_vcr = vectorclock.VectorClockRev(c_doc.rev) + if doc_vcr.is_newer(c_vcr): + c_revs_to_prune.append(c_doc.rev) + elif doc.same_content_as(c_doc): + c_revs_to_prune.append(c_doc.rev) + doc_vcr.maximize(c_vcr) + autoresolved = True + if autoresolved: + doc_vcr.increment(self._replica_uid) + doc.rev = doc_vcr.as_str() + c = self._db_handle.cursor() + self._delete_conflicts(c, doc, c_revs_to_prune) + + def _force_doc_sync_conflict(self, doc): + my_doc = self._get_doc(doc.doc_id) + c = self._db_handle.cursor() + self._prune_conflicts(doc, vectorclock.VectorClockRev(doc.rev)) + self._add_conflict(c, doc.doc_id, my_doc.rev, my_doc.get_json()) + doc.has_conflicts = True + self._put_and_update_indexes(my_doc, doc) + + def resolve_doc(self, doc, conflicted_doc_revs): + with self._db_handle: + cur_doc = self._get_doc(doc.doc_id) + # TODO: https://bugs.launchpad.net/u1db/+bug/928274 + # I think we have a logic bug in resolve_doc + # Specifically, cur_doc.rev is always in the final vector + # clock of revisions that we supersede, even if it wasn't in + # conflicted_doc_revs. We still add it as a conflict, but the + # fact that _put_doc_if_newer propagates resolutions means I + # think that conflict could accidentally be resolved. We need + # to add a test for this case first. (create a rev, create a + # conflict, create another conflict, resolve the first rev + # and first conflict, then make sure that the resolved + # rev doesn't supersede the second conflict rev.) It *might* + # not matter, because the superseding rev is in as a + # conflict, but it does seem incorrect + new_rev = self._ensure_maximal_rev(cur_doc.rev, + conflicted_doc_revs) + superseded_revs = set(conflicted_doc_revs) + c = self._db_handle.cursor() + doc.rev = new_rev + if cur_doc.rev in superseded_revs: + self._put_and_update_indexes(cur_doc, doc) + else: + self._add_conflict(c, doc.doc_id, new_rev, doc.get_json()) + # TODO: Is there some way that we could construct a rev that would + # end up in superseded_revs, such that we add a conflict, and + # then immediately delete it? + self._delete_conflicts(c, doc, superseded_revs) + + def list_indexes(self): + """Return the list of indexes and their definitions.""" + c = self._db_handle.cursor() + # TODO: How do we test the ordering? + c.execute("SELECT name, field FROM index_definitions" + " ORDER BY name, offset") + definitions = [] + cur_name = None + for name, field in c.fetchall(): + if cur_name != name: + definitions.append((name, [])) + cur_name = name + definitions[-1][-1].append(field) + return definitions + + def _get_index_definition(self, index_name): + """Return the stored definition for a given index_name.""" + c = self._db_handle.cursor() + c.execute("SELECT field FROM index_definitions" + " WHERE name = ? ORDER BY offset", (index_name,)) + fields = [x[0] for x in c.fetchall()] + if not fields: + raise errors.IndexDoesNotExist + return fields + + @staticmethod + def _strip_glob(value): + """Remove the trailing * from a value.""" + assert value[-1] == '*' + return value[:-1] + + def _format_query(self, definition, key_values): + # First, build the definition. We join the document_fields table + # against itself, as many times as the 'width' of our definition. + # We then do a query for each key_value, one-at-a-time. + # Note: All of these strings are static, we could cache them, etc. + tables = ["document_fields d%d" % i for i in range(len(definition))] + novalue_where = ["d.doc_id = d%d.doc_id" + " AND d%d.field_name = ?" + % (i, i) for i in range(len(definition))] + wildcard_where = [novalue_where[i] + + (" AND d%d.value NOT NULL" % (i,)) + for i in range(len(definition))] + exact_where = [novalue_where[i] + + (" AND d%d.value = ?" % (i,)) + for i in range(len(definition))] + like_where = [novalue_where[i] + + (" AND d%d.value GLOB ?" % (i,)) + for i in range(len(definition))] + is_wildcard = False + # Merge the lists together, so that: + # [field1, field2, field3], [val1, val2, val3] + # Becomes: + # (field1, val1, field2, val2, field3, val3) + args = [] + where = [] + for idx, (field, value) in enumerate(zip(definition, key_values)): + args.append(field) + if value.endswith('*'): + if value == '*': + where.append(wildcard_where[idx]) + else: + # This is a glob match + if is_wildcard: + # We can't have a partial wildcard following + # another wildcard + raise errors.InvalidGlobbing + where.append(like_where[idx]) + args.append(value) + is_wildcard = True + else: + if is_wildcard: + raise errors.InvalidGlobbing + where.append(exact_where[idx]) + args.append(value) + statement = ( + "SELECT d.doc_id, d.doc_rev, d.content, count(c.doc_rev) FROM " + "document d, %s LEFT OUTER JOIN conflicts c ON c.doc_id = " + "d.doc_id WHERE %s GROUP BY d.doc_id, d.doc_rev, d.content ORDER " + "BY %s;" % (', '.join(tables), ' AND '.join(where), ', '.join( + ['d%d.value' % i for i in range(len(definition))]))) + return statement, args + + def get_from_index(self, index_name, *key_values): + definition = self._get_index_definition(index_name) + if len(key_values) != len(definition): + raise errors.InvalidValueForIndex() + statement, args = self._format_query(definition, key_values) + c = self._db_handle.cursor() + try: + c.execute(statement, tuple(args)) + except dbapi2.OperationalError as e: + raise dbapi2.OperationalError( + str(e) + + '\nstatement: %s\nargs: %s\n' % (statement, args)) + res = c.fetchall() + results = [] + for row in res: + doc = self._factory(row[0], row[1], row[2]) + doc.has_conflicts = row[3] > 0 + results.append(doc) + return results + + def _format_range_query(self, definition, start_value, end_value): + tables = ["document_fields d%d" % i for i in range(len(definition))] + novalue_where = [ + "d.doc_id = d%d.doc_id AND d%d.field_name = ?" % (i, i) for i in + range(len(definition))] + wildcard_where = [ + novalue_where[i] + (" AND d%d.value NOT NULL" % (i,)) for i in + range(len(definition))] + like_where = [ + novalue_where[i] + ( + " AND (d%d.value < ? OR d%d.value GLOB ?)" % (i, i)) for i in + range(len(definition))] + range_where_lower = [ + novalue_where[i] + (" AND d%d.value >= ?" % (i,)) for i in + range(len(definition))] + range_where_upper = [ + novalue_where[i] + (" AND d%d.value <= ?" % (i,)) for i in + range(len(definition))] + args = [] + where = [] + if start_value: + if isinstance(start_value, basestring): + start_value = (start_value,) + if len(start_value) != len(definition): + raise errors.InvalidValueForIndex() + is_wildcard = False + for idx, (field, value) in enumerate(zip(definition, start_value)): + args.append(field) + if value.endswith('*'): + if value == '*': + where.append(wildcard_where[idx]) + else: + # This is a glob match + if is_wildcard: + # We can't have a partial wildcard following + # another wildcard + raise errors.InvalidGlobbing + where.append(range_where_lower[idx]) + args.append(self._strip_glob(value)) + is_wildcard = True + else: + if is_wildcard: + raise errors.InvalidGlobbing + where.append(range_where_lower[idx]) + args.append(value) + if end_value: + if isinstance(end_value, basestring): + end_value = (end_value,) + if len(end_value) != len(definition): + raise errors.InvalidValueForIndex() + is_wildcard = False + for idx, (field, value) in enumerate(zip(definition, end_value)): + args.append(field) + if value.endswith('*'): + if value == '*': + where.append(wildcard_where[idx]) + else: + # This is a glob match + if is_wildcard: + # We can't have a partial wildcard following + # another wildcard + raise errors.InvalidGlobbing + where.append(like_where[idx]) + args.append(self._strip_glob(value)) + args.append(value) + is_wildcard = True + else: + if is_wildcard: + raise errors.InvalidGlobbing + where.append(range_where_upper[idx]) + args.append(value) + statement = ( + "SELECT d.doc_id, d.doc_rev, d.content, count(c.doc_rev) FROM " + "document d, %s LEFT OUTER JOIN conflicts c ON c.doc_id = " + "d.doc_id WHERE %s GROUP BY d.doc_id, d.doc_rev, d.content ORDER " + "BY %s;" % (', '.join(tables), ' AND '.join(where), ', '.join( + ['d%d.value' % i for i in range(len(definition))]))) + return statement, args + + def get_range_from_index(self, index_name, start_value=None, + end_value=None): + """Return all documents with key values in the specified range.""" + definition = self._get_index_definition(index_name) + statement, args = self._format_range_query( + definition, start_value, end_value) + c = self._db_handle.cursor() + try: + c.execute(statement, tuple(args)) + except dbapi2.OperationalError as e: + raise dbapi2.OperationalError( + str(e) + + '\nstatement: %s\nargs: %s\n' % (statement, args)) + res = c.fetchall() + results = [] + for row in res: + doc = self._factory(row[0], row[1], row[2]) + doc.has_conflicts = row[3] > 0 + results.append(doc) + return results + + def get_index_keys(self, index_name): + c = self._db_handle.cursor() + definition = self._get_index_definition(index_name) + value_fields = ', '.join([ + 'd%d.value' % i for i in range(len(definition))]) + tables = ["document_fields d%d" % i for i in range(len(definition))] + novalue_where = [ + "d.doc_id = d%d.doc_id AND d%d.field_name = ?" % (i, i) for i in + range(len(definition))] + where = [ + novalue_where[i] + (" AND d%d.value NOT NULL" % (i,)) for i in + range(len(definition))] + statement = ( + "SELECT %s FROM document d, %s WHERE %s GROUP BY %s;" % ( + value_fields, ', '.join(tables), ' AND '.join(where), + value_fields)) + try: + c.execute(statement, tuple(definition)) + except dbapi2.OperationalError as e: + raise dbapi2.OperationalError( + str(e) + + '\nstatement: %s\nargs: %s\n' % (statement, tuple(definition))) + return c.fetchall() + + def delete_index(self, index_name): + with self._db_handle: + c = self._db_handle.cursor() + c.execute("DELETE FROM index_definitions WHERE name = ?", + (index_name,)) + c.execute( + "DELETE FROM document_fields WHERE document_fields.field_name " + " NOT IN (SELECT field from index_definitions)") + + +class SQLiteSyncTarget(CommonSyncTarget): + + def get_sync_info(self, source_replica_uid): + source_gen, source_trans_id = self._db._get_replica_gen_and_trans_id( + source_replica_uid) + my_gen, my_trans_id = self._db._get_generation_info() + return ( + self._db._replica_uid, my_gen, my_trans_id, source_gen, + source_trans_id) + + def record_sync_info(self, source_replica_uid, source_replica_generation, + source_replica_transaction_id): + if self._trace_hook: + self._trace_hook('record_sync_info') + self._db._set_replica_gen_and_trans_id( + source_replica_uid, source_replica_generation, + source_replica_transaction_id) + + +class SQLitePartialExpandDatabase(SQLiteDatabase): + """An SQLite Backend that expands documents into a document_field table. + + It stores the original document text in document.doc. For fields that are + indexed, the data goes into document_fields. + """ + + _index_storage_value = 'expand referenced' + + def _get_indexed_fields(self): + """Determine what fields are indexed.""" + c = self._db_handle.cursor() + c.execute("SELECT field FROM index_definitions") + return set([x[0] for x in c.fetchall()]) + + def _evaluate_index(self, raw_doc, field): + parser = query_parser.Parser() + getter = parser.parse(field) + return getter.get(raw_doc) + + def _put_and_update_indexes(self, old_doc, doc): + c = self._db_handle.cursor() + if doc and not doc.is_tombstone(): + raw_doc = json.loads(doc.get_json()) + else: + raw_doc = {} + if old_doc is not None: + c.execute("UPDATE document SET doc_rev=?, content=?" + " WHERE doc_id = ?", + (doc.rev, doc.get_json(), doc.doc_id)) + c.execute("DELETE FROM document_fields WHERE doc_id = ?", + (doc.doc_id,)) + else: + c.execute("INSERT INTO document (doc_id, doc_rev, content)" + " VALUES (?, ?, ?)", + (doc.doc_id, doc.rev, doc.get_json())) + indexed_fields = self._get_indexed_fields() + if indexed_fields: + # It is expected that len(indexed_fields) is shorter than + # len(raw_doc) + getters = [(field, self._parse_index_definition(field)) + for field in indexed_fields] + self._update_indexes(doc.doc_id, raw_doc, getters, c) + trans_id = self._allocate_transaction_id() + c.execute("INSERT INTO transaction_log(doc_id, transaction_id)" + " VALUES (?, ?)", (doc.doc_id, trans_id)) + + def create_index(self, index_name, *index_expressions): + with self._db_handle: + c = self._db_handle.cursor() + cur_fields = self._get_indexed_fields() + definition = [(index_name, idx, field) + for idx, field in enumerate(index_expressions)] + try: + c.executemany("INSERT INTO index_definitions VALUES (?, ?, ?)", + definition) + except dbapi2.IntegrityError as e: + stored_def = self._get_index_definition(index_name) + if stored_def == [x[-1] for x in definition]: + return + raise errors.IndexNameTakenError( + str(e) + + str(sys.exc_info()[2]) + ) + new_fields = set( + [f for f in index_expressions if f not in cur_fields]) + if new_fields: + self._update_all_indexes(new_fields) + + def _iter_all_docs(self): + c = self._db_handle.cursor() + c.execute("SELECT doc_id, content FROM document") + while True: + next_rows = c.fetchmany() + if not next_rows: + break + for row in next_rows: + yield row + + def _update_all_indexes(self, new_fields): + """Iterate all the documents, and add content to document_fields. + + :param new_fields: The index definitions that need to be added. + """ + getters = [(field, self._parse_index_definition(field)) + for field in new_fields] + c = self._db_handle.cursor() + for doc_id, doc in self._iter_all_docs(): + if doc is None: + continue + raw_doc = json.loads(doc) + self._update_indexes(doc_id, raw_doc, getters, c) + + +SQLiteDatabase.register_implementation(SQLitePartialExpandDatabase) |